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Does the problem only occur during boot? Meaning, does everything function normally (normal speed)?
Try running something that demands a lot of your computer like a test or a heavy game or something and see what the performance is then...
Or make an ISO or just copy the content of a disc on to one drive and try to copy it to the others, see how they handle the stress.
Maybe you should check your connectors, I have had something that resembles your problem because my cable wasn't 100% any more.
If that's all allright then it can only be your OS. You might want to try a new clean install and see how that works out.
Then again, I am just thinking out loud here. Maybe someone else will be able to help you better. Good luck and let us know what was the solution once you find it.
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The most likely way for the world to be destroyed, most experts agree, is by accident. That's where we come in; we're computer professionals. We cause accidents.
- Nathaniel Borenstein
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