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cliche
The complexity of the universe can be understood only at the subatomic level. It is complex enough that no one fully understands it yet.
Someone (God) made the subatomic particles and designed them in such a way as to combine and form the basic atoms of the elements. Because of these amazing subatomic particles the elements form the ionic and covalent bonds that create all the compounds and molecules in our world.
The equations (math, chemistry, or physics) are nothing more than an aid to help understand what we observe
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