I believe if you copy one of the "my document" into the folder containing the other "my document" a dialog will appear informing you that there is already a "my document" folder, it will ask you if you want to overwrite it, which will merge the folder.
This is assuming that there aren't any files in "my document"-1 with the same name and different content than those that are within "my document"-2. If that's not the case, then you should do it in order such that copying "my document"-1 is the most recent version of files, gets pasted in the folder containing "my document"-2 and click on "Overwrite", otherwise, it wouldn't really matter which order you overwrite files.
I'm not too sure if my answer is relevant to your question
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